Professur für Systembiologie mit dem Schwerpunkt Genomik, Proteomik und Transkriptomik
Präsidium der Justus-Liebig-Universität Gießen » Fachbereiche » Fachbereich 08 - Biologie und Chemie » Dekanat Fachbereich 08 - Biologie und Chemie » Fachgebiet Biologie
Type of organisation: Professorship
Projects
1 of 6
- de.NBl - Deutsches Netzwerk für Bioinformatikinfrastruktur
01/01/2025 - 31/12/2025
Hessian Ministry of Higher Education, Research, Science and the Arts (HMWK) - de.KCD TP - Deutsches Kompetenzzentrum Cloud-Technologien für Datenmanagement und -verarbeitung
01/12/2023 - 30/11/2026 - Tree-M - Mechanisms of resilience and environmental impact of the tree leaf microbiome
01/01/2023 - 31/12/2026
Hessian Ministry of Higher Education, Research, Science and the Arts (HMWK) - Deep-Legion, TP B - Erkennung von Virulenzfaktor-Proteindomänen in Legionellen mit Hilfe von Deep Autoencodern
01/03/2022 - 28/02/2025
Federal Ministry of Research, Technology and Space, former: Federal Ministry of Education and Research (BMFTR, BMBF) - Evolution von Gennetzwerken: Die Ranunculales als Modellordnung für evolutionäre Innovation
01/01/2022 - 31/03/2025
German Research Foundation (DFG)
Publications 
2 of 30
2 of 30
- Deep Transfer Learning Enables Robust Prediction of Antimicrobial Resistance for Novel Antibiotics (2022)
Ren, Yunxiao; Chakraborty, Trinad; Doijad, Swapnil; et al. - Evolutionarily stable gene clusters shed light on the common grounds of pathogenicity in the Acinetobacter calcoaceticus-baumannii complex (2022)
Djahanschiri, Bardya; Di Venanzio, Gisela; Distel, Jesus; et al. - Multi-label classification for multi-drug resistance prediction of Escherichia coli (2022)
Ren, Yunxiao; Chakraborty, Trinad; Doijad, Swapnil; et al. - Prediction of antimicrobial resistance based on whole-genome sequencing and machine learning (2022)
Ren, Yunxiao; Chakraborty, Trinad; Doijad, Swapnil; et al. - What goes around comes around: Artificial circular RNAs bypass cellular antiviral responses (2022)
Breuer, J; Barth, P; Noe, Y; et al. - Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification (2021)
Schwengers, Oliver; Jelonek, Lukas; Dieckmann, Marius Alfred; et al. - Countering reproducibility issues in mathematical models with software engineering techniques: A case study using a one-dimensional mathematical model of the atrioventricular node (2021)
Schölzel, Christopher; Blesius, Valeria; Ernst, Gernot; et al. - EDGAR3.0: comparative genomics and phylogenomics on a scalable infrastructure (2021)
Dieckmann, Marius Alfred; Beyvers, Sebastian; Nkouamedjo-Fankep, Rudel Christian; et al. - Expansion and re-classification of the extracytoplasmic function (ECF) sigma factor family (2021)
Casas-Pastor, D; Müller, RR; Jaenicke, S; et al. - Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14 (2021)
Wibberg, Daniel; Genzel, Franziska; Verwaaijen, Bart; et al.
