Journal article

EMMA: a platform for consistent storage and efficient analysis of microarray data


Authors listDondrup, M; Goesmann, A; Bartels, D; Kalinowski, J; Krause, L; Linke, B; Rupp, O; Sczyrba, A; Pühler, A; Meyer, F

Publication year2003

Pages135-146

JournalJournal of Biotechnology

Volume number106

Issue number2-3

ISSN0168-1656

eISSN1873-4863

DOI Linkhttps://doi.org/10.1016/j.jbiotec.2003.08.010

PublisherElsevier


Abstract
As a high throughput technique, microarray experiments produce large data sets, consisting of measured data, laboratory protocols, and experimental settings. We have implemented the open source platform EMMA to store and analyze these data. The system provides automated pipelines for data processing and has a modular architecture that can be easily extended. EMMA features detailed reports about spots and their corresponding measurements. In addition to routine data analysis algorithms, the system can be integrated with other components that contain additional data sources (e.g. genome annotation systems).



Citation Styles

Harvard Citation styleDondrup, M., Goesmann, A., Bartels, D., Kalinowski, J., Krause, L., Linke, B., et al. (2003) EMMA: a platform for consistent storage and efficient analysis of microarray data, Journal of Biotechnology, 106(2-3), pp. 135-146. https://doi.org/10.1016/j.jbiotec.2003.08.010

APA Citation styleDondrup, M., Goesmann, A., Bartels, D., Kalinowski, J., Krause, L., Linke, B., Rupp, O., Sczyrba, A., Pühler, A., & Meyer, F. (2003). EMMA: a platform for consistent storage and efficient analysis of microarray data. Journal of Biotechnology. 106(2-3), 135-146. https://doi.org/10.1016/j.jbiotec.2003.08.010


Last updated on 2025-21-05 at 15:34